Search term chr11:534289, chr17:7578406, chr17:7577538, chr17:7577120 returned results from Exome Somatic dbGENVOC section.
OSCC_GB: Gingivo-buccal oral squamous cell carcinoma
Search term chr11:534289, chr17:7578406, chr17:7577538, chr17:7577120 returned results from TCGA Exome Somatic Variation section.
BM-TCGA: Buccal Mucosa; OC-TCGA: Oral Cavity; OT-TCGA: Oral Tongue
NOTE: Data from Head and Neck Squamous Cell carcinoma project of TCGA (HNSCC-TCGA)
| DBID | Gene name | Entrez Id | Disease | Chrom | Start | End | Genome change | UCSC Browser | cDNA change | Codon change | Protein change | Variant class | Variant type | Referrence Allele | Tumor Allele | dbSNP ID | Sample Id | Annotation transcript | Transcript strand | Transcript exon | Transcript position | Reference |
|---|
| tcga4465 | HRAS | 3265 | OT-TCGA | chr11 | 534289 | 534289 | g.chr11:534289C>T | chr11:534289-534289 | c.34G>A | c.(34-36)Ggc>Agc | p.G12S | Missense_Mutation | SNP | C | T | rs104894229 | TCGA-CR-7382-01A-11D | ENST00000451590.1 | - | 2 | 221 | TCGA |
| tcga4886 | HRAS | 3265 | OT-TCGA | chr11 | 534289 | 534289 | g.chr11:534289C>T | chr11:534289-534289 | c.34G>A | c.(34-36)Ggc>Agc | p.G12S | Missense_Mutation | SNP | C | T | rs104894229 | TCGA-CR-7394-01A-11D | ENST00000451590.1 | - | 2 | 221 | TCGA |
| tcga13187 | HRAS | 3265 | OT-TCGA | chr11 | 534289 | 534289 | g.chr11:534289C>T | chr11:534289-534289 | c.34G>A | c.(34-36)Ggc>Agc | p.G12S | Missense_Mutation | SNP | C | T | rs104894229 | TCGA-CV-A6JO-01B-11D | ENST00000451590.1 | - | 2 | 221 | TCGA |
| tcga16807 | HRAS | 3265 | OT-TCGA | chr11 | 534289 | 534289 | g.chr11:534289C>T | chr11:534289-534289 | c.34G>A | c.(34-36)Ggc>Agc | p.G12S | Missense_Mutation | SNP | C | T | rs104894229 | TCGA-IQ-A61E-01A-22D | ENST00000451590.1 | - | 2 | 221 | TCGA |
| tcga19815 | HRAS | 3265 | BM-TCGA | chr11 | 534289 | 534289 | g.chr11:534289C>T | chr11:534289-534289 | c.34G>A | c.(34-36)Ggc>Agc | p.G12S | Missense_Mutation | SNP | C | T | rs104894229 | TCGA-CN-A63V-01A-11D | ENST00000451590.1 | - | 2 | 221 | TCGA |
| tcga25233 | HRAS | 3265 | BM-TCGA | chr11 | 534289 | 534289 | g.chr11:534289C>T | chr11:534289-534289 | c.34G>A | c.(34-36)Ggc>Agc | p.G12S | Missense_Mutation | SNP | C | T | rs104894229 | TCGA-H7-8501-01A-11D | ENST00000451590.1 | - | 2 | 221 | TCGA |
| tcga25727 | HRAS | 3265 | BM-TCGA | chr11 | 534289 | 534289 | g.chr11:534289C>A | chr11:534289-534289 | c.34G>T | c.(34-36)Ggc>Tgc | p.G12C | Missense_Mutation | SNP | C | A | rs104894229 | TCGA-P3-A6T2-01A-11D | ENST00000451590.1 | - | 2 | 221 | TCGA |
| tcga35176 | HRAS | 3265 | OC-TCGA | chr11 | 534289 | 534289 | g.chr11:534289C>A | chr11:534289-534289 | c.34G>T | c.(34-36)Ggc>Tgc | p.G12C | Missense_Mutation | SNP | C | A | rs104894229 | TCGA-CV-7183-01A-11D | ENST00000451590.1 | - | 2 | 221 | TCGA |
| tcga35254 | HRAS | 3265 | OC-TCGA | chr11 | 534289 | 534289 | g.chr11:534289C>A | chr11:534289-534289 | c.34G>T | c.(34-36)Ggc>Tgc | p.G12C | Missense_Mutation | SNP | C | A | rs104894229 | TCGA-CV-7183-01A-11D | ENST00000451590.1 | - | 2 | 221 | TCGA |
| tcga1565 | TP53 | 7157 | OT-TCGA | chr17 | 7577120 | 7577120 | g.chr17:7577120C>T | chr17:7577120-7577120 | c.818G>A | c.(817-819)cGt>cAt | p.R273H | Missense_Mutation | SNP | C | T | rs28934576 | TCGA-CN-4733-01A-02D | ENST00000269305.4 | - | 8 | 1007 | TCGA |
| tcga3141 | TP53 | 7157 | OT-TCGA | chr17 | 7577120 | 7577120 | g.chr17:7577120C>T | chr17:7577120-7577120 | c.818G>A | c.(817-819)cGt>cAt | p.R273H | Missense_Mutation | SNP | C | T | rs28934576 | TCGA-CQ-5329-01A-01D | ENST00000269305.4 | - | 8 | 1007 | TCGA |
| tcga6325 | TP53 | 7157 | OT-TCGA | chr17 | 7577120 | 7577120 | g.chr17:7577120C>T | chr17:7577120-7577120 | c.818G>A | c.(817-819)cGt>cAt | p.R273H | Missense_Mutation | SNP | C | T | rs28934576 | TCGA-CV-6436-01A-11D | ENST00000269305.4 | - | 8 | 1007 | TCGA |
| tcga13743 | TP53 | 7157 | OT-TCGA | chr17 | 7577120 | 7577120 | g.chr17:7577120C>T | chr17:7577120-7577120 | c.818G>A | c.(817-819)cGt>cAt | p.R273H | Missense_Mutation | SNP | C | T | rs28934576 | TCGA-D6-6515-01A-21D | ENST00000269305.4 | - | 8 | 1007 | TCGA |
| tcga33055 | TP53 | 7157 | OC-TCGA | chr17 | 7577120 | 7577120 | g.chr17:7577120C>T | chr17:7577120-7577120 | c.818G>A | c.(817-819)cGt>cAt | p.R273H | Missense_Mutation | SNP | C | T | rs28934576 | TCGA-CV-7090-01A-11D | ENST00000269305.4 | - | 8 | 1007 | TCGA |
| tcga3853 | TP53 | 7157 | OT-TCGA | chr17 | 7577538 | 7577538 | g.chr17:7577538C>T | chr17:7577538-7577538 | c.743G>A | c.(742-744)cGg>cAg | p.R248Q | Missense_Mutation | SNP | C | T | rs11540652 | TCGA-CQ-6224-01A-11D | ENST00000269305.4 | - | 7 | 932 | TCGA |
| tcga5317 | TP53 | 7157 | OT-TCGA | chr17 | 7577538 | 7577538 | g.chr17:7577538C>T | chr17:7577538-7577538 | c.743G>A | c.(742-744)cGg>cAg | p.R248Q | Missense_Mutation | SNP | C | T | rs11540652 | TCGA-CV-5970-01A-11D | ENST00000269305.4 | - | 7 | 932 | TCGA |
| tcga5573 | TP53 | 7157 | OT-TCGA | chr17 | 7577538 | 7577538 | g.chr17:7577538C>T | chr17:7577538-7577538 | c.743G>A | c.(742-744)cGg>cAg | p.R248Q | Missense_Mutation | SNP | C | T | rs11540652 | TCGA-CV-5970-01A-11D | ENST00000269305.4 | - | 7 | 932 | TCGA |
| tcga6071 | TP53 | 7157 | OT-TCGA | chr17 | 7577538 | 7577538 | g.chr17:7577538C>T | chr17:7577538-7577538 | c.743G>A | c.(742-744)cGg>cAg | p.R248Q | Missense_Mutation | SNP | C | T | rs11540652 | TCGA-CV-5979-01A-11D | ENST00000269305.4 | - | 7 | 932 | TCGA |
| tcga15767 | TP53 | 7157 | OT-TCGA | chr17 | 7577538 | 7577538 | g.chr17:7577538C>T | chr17:7577538-7577538 | c.743G>A | c.(742-744)cGg>cAg | p.R248Q | Missense_Mutation | SNP | C | T | rs11540652 | TCGA-F7-A61S-01A-11D | ENST00000269305.4 | - | 7 | 932 | TCGA |
| tcga17383 | TP53 | 7157 | OT-TCGA | chr17 | 7577538 | 7577538 | g.chr17:7577538C>T | chr17:7577538-7577538 | c.743G>A | c.(742-744)cGg>cAg | p.R248Q | Missense_Mutation | SNP | C | T | rs11540652 | TCGA-IQ-A61L-01A-11D | ENST00000269305.4 | - | 7 | 932 | TCGA |
| tcga18036 | TP53 | 7157 | OT-TCGA | chr17 | 7577538 | 7577538 | g.chr17:7577538C>T | chr17:7577538-7577538 | c.743G>A | c.(742-744)cGg>cAg | p.R248Q | Missense_Mutation | SNP | C | T | rs11540652 | TCGA-QK-A652-01A-11D | ENST00000269305.4 | - | 7 | 932 | TCGA |
| tcga20960 | TP53 | 7157 | BM-TCGA | chr17 | 7577538 | 7577538 | g.chr17:7577538C>T | chr17:7577538-7577538 | c.743G>A | c.(742-744)cGg>cAg | p.R248Q | Missense_Mutation | SNP | C | T | rs11540652 | TCGA-CV-A464-01A-11D | ENST00000269305.4 | - | 7 | 932 | TCGA |
| tcga29758 | TP53 | 7157 | OC-TCGA | chr17 | 7577538 | 7577538 | g.chr17:7577538C>T | chr17:7577538-7577538 | c.743G>A | c.(742-744)cGg>cAg | p.R248Q | Missense_Mutation | SNP | C | T | rs11540652 | TCGA-CR-7368-01A-11D | ENST00000269305.4 | - | 7 | 932 | TCGA |
| tcga2024 | TP53 | 7157 | OT-TCGA | chr17 | 7578406 | 7578406 | g.chr17:7578406C>T | chr17:7578406-7578406 | c.524G>A | c.(523-525)cGc>cAc | p.R175H | Missense_Mutation | SNP | C | T | rs28934578 | TCGA-CN-5370-01A-01D | ENST00000269305.4 | - | 5 | 713 | TCGA |
| tcga17292 | TP53 | 7157 | OT-TCGA | chr17 | 7578406 | 7578406 | g.chr17:7578406C>T | chr17:7578406-7578406 | c.524G>A | c.(523-525)cGc>cAc | p.R175H | Missense_Mutation | SNP | C | T | rs28934578 | TCGA-IQ-A61K-01A-11D | ENST00000269305.4 | - | 5 | 713 | TCGA |
| tcga18620 | TP53 | 7157 | OT-TCGA | chr17 | 7578406 | 7578406 | g.chr17:7578406C>T | chr17:7578406-7578406 | c.524G>A | c.(523-525)cGc>cAc | p.R175H | Missense_Mutation | SNP | C | T | rs28934578 | TCGA-UF-A7JS-01A-11D | ENST00000269305.4 | - | 5 | 713 | TCGA |
| tcga20961 | TP53 | 7157 | BM-TCGA | chr17 | 7578406 | 7578406 | g.chr17:7578406C>T | chr17:7578406-7578406 | c.524G>A | c.(523-525)cGc>cAc | p.R175H | Missense_Mutation | SNP | C | T | rs28934578 | TCGA-CV-A464-01A-11D | ENST00000269305.4 | - | 5 | 713 | TCGA |
| tcga26031 | TP53 | 7157 | BM-TCGA | chr17 | 7578406 | 7578406 | g.chr17:7578406C>T | chr17:7578406-7578406 | c.524G>A | c.(523-525)cGc>cAc | p.R175H | Missense_Mutation | SNP | C | T | rs28934578 | TCGA-UF-A7JA-01A-12D | ENST00000269305.4 | - | 5 | 713 | TCGA |
| tcga27823 | TP53 | 7157 | OC-TCGA | chr17 | 7578406 | 7578406 | g.chr17:7578406C>T | chr17:7578406-7578406 | c.524G>A | c.(523-525)cGc>cAc | p.R175H | Missense_Mutation | SNP | C | T | rs28934578 | TCGA-CN-6994-01A-11D | ENST00000269305.4 | - | 5 | 713 | TCGA |
| tcga37623 | TP53 | 7157 | OC-TCGA | chr17 | 7578406 | 7578406 | g.chr17:7578406C>T | chr17:7578406-7578406 | c.524G>A | c.(523-525)cGc>cAc | p.R175H | Missense_Mutation | SNP | C | T | rs28934578 | TCGA-CV-7416-01A-11D | ENST00000269305.4 | - | 5 | 713 | TCGA |
| tcga37722 | TP53 | 7157 | OC-TCGA | chr17 | 7578406 | 7578406 | g.chr17:7578406C>T | chr17:7578406-7578406 | c.524G>A | c.(523-525)cGc>cAc | p.R175H | Missense_Mutation | SNP | C | T | rs28934578 | TCGA-CV-7416-01A-11D | ENST00000269305.4 | - | 5 | 713 | TCGA |