dbGENVOC search result

DBID	Gene name	Entrez Id	Disease	Chrom	Start	End	Genome change	UCSC Browser	cDNA change	Codon change	Protein change	Variant class	Variant type	Referrence Allele	Tumor Allele	dbSNP ID	Sample id	Annotation transcript	Transcript strand	Transcript exon	Transcript position	Reference
esm9705	FAT1	2195	OSCC_GB	chr4	187627867	187627867	g.chr4:187627867C>A	chr4:187627867-187627867	c.3115G>T	c.(3115-3117)Gaa>Taa	p.E1039*	Nonsense_Mutation	SNP	C	A	-	NIBMG-V479-GB	ENST00000441802.2	-	2	3324	NIBMG
esm9940	FAT1	2195	OSCC_GB	chr4	187628023	187628023	g.chr4:187628023G>A	chr4:187628023-187628023	c.2959C>T	c.(2959-2961)Cag>Tag	p.Q987*	Nonsense_Mutation	SNP	G	A	-	NIBMG-W904-GB	ENST00000441802.2	-	2	3168	NIBMG
esm10691	FAT1	2195	OSCC_GB	chr4	187541913	187541913	g.chr4:187541913G>A	chr4:187541913-187541913	c.5827C>T	c.(5827-5829)Cag>Tag	p.Q1943*	Nonsense_Mutation	SNP	G	A	-	NIBMG-X635-GB	ENST00000441802.2	-	10	6036	NIBMG
esm10714	FAT1	2195	OSCC_GB	chr4	187628697	187628704	g.chr4:187628697_187628704delTCCTCATT	chr4:187628697-187628704	c.2278_2285delAATGAGGA	c.(2278-2286)aatgaggatfs	p.NED760fs	Frame_Shift_Del	DEL	TCCTCATT	-	rs371371201	NIBMG-X635-GB	ENST00000441802.2	-	2	2487_2494	NIBMG
esm10847	FAT1	2195	OSCC_GB	chr4	187542800	187542801	g.chr4:187542800_187542801delAT	chr4:187542800-187542801	c.4939_4940delAT	c.(4939-4941)atgfs	p.M1647fs	Frame_Shift_Del	DEL	AT	-	-	NIBMG-X876-GB	ENST00000441802.2	-	10	5148_5149	NIBMG
esm11136	FAT1	2195	OSCC_GB	chr4	187540906	187540906	g.chr4:187540906A>G	chr4:187540906-187540906	c.6834T>C	c.(6832-6834)gaT>gaC	p.D2278D	Silent	SNP	A	G	-	NIBMG-Y207-GB	ENST00000441802.2	-	10	7043	NIBMG
esm11246	FAT1	2195	OSCC_GB	chr4	187628173	187628173	g.chr4:187628173G>A	chr4:187628173-187628173	c.2809C>T	c.(2809-2811)Cga>Tga	p.R937*	Nonsense_Mutation	SNP	G	A	rs547340067	NIBMG-B034-GB	ENST00000441802.2	-	2	3018	NIBMG
esm11351	FAT1	2195	OSCC_GB	chr4	187538220	187538220	g.chr4:187538220G>C	chr4:187538220-187538220	c.9014C>G	c.(9013-9015)tCa>tGa	p.S3005*	Nonsense_Mutation	SNP	G	C	-	NIBMG-N017-GB	ENST00000441802.2	-	11	9223	NIBMG
esm11401	FAT1	2195	OSCC_GB	chr4	187540425	187540445	g.chr4:187540425_187540445delCAAAATGTTTATGATCATTGC	chr4:187540425-187540445	c.7295_7315delGCAATGATCATAAACA	c.(7294-7317)ggcaatgatcataaaca	p.GNDHKHF2432del	In_Frame_Del	DEL	CAAAATGTTTATGATCATTGC	-	rs183723851\|rs368556204	NIBMG-N017-GB	ENST00000441802.2	-	10	7504_7524	NIBMG
esm11509	FAT1	2195	OSCC_GB	chr4	187542357	187542357	g.chr4:187542357G>A	chr4:187542357-187542357	c.5383C>T	c.(5383-5385)Cga>Tga	p.R1795*	Nonsense_Mutation	SNP	G	A	-	NIBMG-W253-GB	ENST00000441802.2	-	10	5592	NIBMG
esm11728	FAT1	2195	OSCC_GB	chr4	187542017	187542017	g.chr4:187542017G>T	chr4:187542017-187542017	c.5723C>A	c.(5722-5724)tCa>tAa	p.S1908*	Nonsense_Mutation	SNP	G	T	-	NIBMG-P481-GB	ENST00000441802.2	-	10	5932	NIBMG
esm11859	FAT1	2195	OSCC_GB	chr4	187584594	187584594	g.chr4:187584594C>A	chr4:187584594-187584594	c.3439G>T	c.(3439-3441)Gaa>Taa	p.E1147*	Nonsense_Mutation	SNP	C	A	-	NIBMG-Q273-GB	ENST00000441802.2	-	3	3648	NIBMG
esm12184	FAT1	2195	OSCC_GB	chr4	187525001	187525002	g.chr4:187525001_187525002insA	chr4:187525001-187525002	c.10678_10679insT	c.(10678-10680)tcafs	p.S3560fs	Frame_Shift_Ins	INS	-	A	-	NIBMG-O481-GB	ENST00000441802.2	-	19	10887_10888	NIBMG
esm12202	FAT1	2195	OSCC_GB	chr4	187541586	187541586	g.chr4:187541586C>A	chr4:187541586-187541586	c.6154G>T	c.(6154-6156)Gaa>Taa	p.E2052*	Nonsense_Mutation	SNP	C	A	-	NIBMG-T839-GB	ENST00000441802.2	-	10	6363	NIBMG
esm12311	FAT1	2195	OSCC_GB	chr4	187541367	187541367	g.chr4:187541367C>A	chr4:187541367-187541367	c.6373G>T	c.(6373-6375)Gaa>Taa	p.E2125*	Nonsense_Mutation	SNP	C	A	-	NIBMG-S202-GB	ENST00000441802.2	-	10	6582	NIBMG
esm12312	FAT1	2195	OSCC_GB	chr4	187629967	187629967	g.chr4:187629967T>A	chr4:187629967-187629967	c.1015A>T	c.(1015-1017)Aaa>Taa	p.K339*	Nonsense_Mutation	SNP	T	A	-	NIBMG-S202-GB	ENST00000441802.2	-	2	1224	NIBMG
esm12603	FAT1	2195	OSCC_GB	chr4	187630778	187630778	g.chr4:187630778C>T	chr4:187630778-187630778	c.204G>A	c.(202-204)tgG>tgA	p.W68*	Nonsense_Mutation	SNP	C	T	-	NIBMG-D489-GB	ENST00000441802.2	-	2	413	NIBMG
esm12696	FAT1	2195	OSCC_GB	chr4	187532783	187532783	g.chr4:187532783G>A	chr4:187532783-187532783	c.9610C>T	c.(9610-9612)Caa>Taa	p.Q3204*	Nonsense_Mutation	SNP	G	A	-	NIBMG-Q595-GB	ENST00000441802.2	-	14	9819	NIBMG
esm14258	FAT1	2195	OSCC_GB	chr4	187524687	187524687	g.chr4:187524687G>A	chr4:187524687-187524687	c.10993C>T	c.(10993-10995)Cga>Tga	p.R3665*	Nonsense_Mutation	SNP	G	A	-	NIBMG-K586-GB	ENST00000441802.2	-	19	11202	NIBMG
esm14470	FAT1	2195	OSCC_GB	chr4	187530469	187530469	g.chr4:187530469C>T	chr4:187530469-187530469	c.10074G>A	c.(10072-10074)atG>atA	p.M3358I	Missense_Mutation	SNP	C	T	-	NIBMG-H104-GB	ENST00000441802.2	-	16	10283	NIBMG
esm14833	FAT1	2195	OSCC_GB	chr4	187549326	187549327	g.chr4:187549326_187549327insCA	chr4:187549326-187549327	c.4791_4792insTG	c.(4789-4794)gtgctgfs	p.L1598fs	Frame_Shift_Ins	INS	-	CA	-	NIBMG-R677-GB	ENST00000441802.2	-	9	5000_5001	NIBMG
esm15748	FAT1	2195	OSCC_GB	chr4	187532573	187532573	g.chr4:187532573C>G	chr4:187532573-187532573	c.9820G>C	c.(9820-9822)Gaa>Caa	p.E3274Q	Missense_Mutation	SNP	C	G	-	NIBMG-V930-GB	ENST00000441802.2	-	14	10029	NIBMG
esm15749	FAT1	2195	OSCC_GB	chr4	187532621	187532621	g.chr4:187532621C>G	chr4:187532621-187532621	c.9772G>C	c.(9772-9774)Gat>Cat	p.D3258H	Missense_Mutation	SNP	C	G	-	NIBMG-V930-GB	ENST00000441802.2	-	14	9981	NIBMG
esm15763	FAT1	2195	OSCC_GB	chr4	187540941	187540942	g.chr4:187540941_187540942insTTCA	chr4:187540941-187540942	c.6798_6799insTGAA	c.(6796-6801)gaagtafs	p.V2267fs	Frame_Shift_Ins	INS	-	TTCA	-	NIBMG-V930-GB	ENST00000441802.2	-	10	7007_7008	NIBMG
esm16578	FAT1	2195	OSCC_GB	chr4	187542269	187542269	g.chr4:187542269G>T	chr4:187542269-187542269	c.5471C>A	c.(5470-5472)tCt>tAt	p.S1824Y	Missense_Mutation	SNP	G	T	-	NIBMG-Z994-GB	ENST00000441802.2	-	10	5680	NIBMG
esm16798	FAT1	2195	OSCC_GB	chr4	187629619	187629630	g.chr4:187629619_187629630delCTAAGACTTTCA	chr4:187629619-187629630	c.1352_1363delTGAAAGTCTTAG	c.(1351-1365)gtgaaagtcttaggt>g	p.VKVL451del	In_Frame_Del	DEL	CTAAGACTTTCA	-	rs369596981	NIBMG-V963-GB	ENST00000441802.2	-	2	1561_1572	NIBMG
esm17198	FAT1	2195	OSCC_GB	chr4	187629914	187629915	g.chr4:187629914_187629915insGTCAC	chr4:187629914-187629915	c.1067_1068insGTGAC	c.(1066-1068)actfs	p.-356fs	Frame_Shift_Ins	INS	-	GTCAC	rs374806294	NIBMG-L997-GB	ENST00000441802.2	-	2	1276_1277	NIBMG
esm17377	FAT1	2195	OSCC_GB	chr4	187628917	187628917	g.chr4:187628917G>A	chr4:187628917-187628917	c.2065C>T	c.(2065-2067)Cag>Tag	p.Q689*	Nonsense_Mutation	SNP	G	A	-	NIBMG-C109-GB	ENST00000441802.2	-	2	2274	NIBMG
esm17441	FAT1	2195	OSCC_GB	chr4	187539951	187539951	g.chr4:187539951G>A	chr4:187539951-187539951	c.7789C>T	c.(7789-7791)Cga>Tga	p.R2597*	Nonsense_Mutation	SNP	G	A	-	NIBMG-E544-GB	ENST00000441802.2	-	10	7998	NIBMG
esm17459	FAT1	2195	OSCC_GB	chr4	187630398	187630399	g.chr4:187630398_187630399insAC	chr4:187630398-187630399	c.583_584insGT	c.(583-585)tttfs	p.F195fs	Frame_Shift_Ins	INS	-	AC	-	NIBMG-E544-GB	ENST00000441802.2	-	2	792_793	NIBMG
esm17512	FAT1	2195	OSCC_GB	chr4	187540293	187540294	g.chr4:187540293_187540294insTACA	chr4:187540293-187540294	c.7446_7447insTGTA	c.(7444-7449)gtaattfs	p.I2483fs	Frame_Shift_Ins	INS	-	TACA	-	NIBMG-G378-GB	ENST00000441802.2	-	10	7655_7656	NIBMG
esm17513	FAT1	2195	OSCC_GB	chr4	187630895	187630896	g.chr4:187630895_187630896insTG	chr4:187630895-187630896	c.86_87insCA	c.(85-87)cagfs	p.Q29fs	Frame_Shift_Ins	INS	-	TG	-	NIBMG-G378-GB	ENST00000441802.2	-	2	295_296	NIBMG
esm17713	FAT1	2195	OSCC_GB	chr4	187525623	187525623	g.chr4:187525623C>A	chr4:187525623-187525623	c.10456G>T	c.(10456-10458)Gag>Tag	p.E3486*	Nonsense_Mutation	SNP	C	A	-	NIBMG-A369-GB	ENST00000441802.2	-	18	10665	NIBMG
esm18182	FAT1	2195	OSCC_GB	chr4	187554893	187554893	g.chr4:187554893G>C	chr4:187554893-187554893	c.4268C>G	c.(4267-4269)tCa>tGa	p.S1423*	Nonsense_Mutation	SNP	G	C	-	NIBMG-M104-GB	ENST00000441802.2	-	7	4477	NIBMG
esm18201	FAT1	2195	OSCC_GB	chr4	187629884	187629897	g.chr4:187629884_187629897delCTTGACTGGCCCGG	chr4:187629884-187629897	c.1085_1098delCCGGGCCAGTCAAG	c.(1084-1098)gccgggccagtcaagfs	p.AGPVK362fs	Frame_Shift_Del	DEL	CTTGACTGGCCCGG	-	rs531890135\|rs11722204\|rs200888325\|rs373642708\|rs367778562	NIBMG-M104-GB	ENST00000441802.2	-	2	1294_1307	NIBMG
esm18322	FAT1	2195	OSCC_GB	chr4	187539071	187539071	g.chr4:187539071G>C	chr4:187539071-187539071	c.8669C>G	c.(8668-8670)tCa>tGa	p.S2890*	Nonsense_Mutation	SNP	G	C	-	NIBMG-K245-GB	ENST00000441802.2	-	10	8878	NIBMG
esm18323	FAT1	2195	OSCC_GB	chr4	187628071	187628071	g.chr4:187628071C>A	chr4:187628071-187628071	c.2911G>T	c.(2911-2913)Gaa>Taa	p.E971*	Nonsense_Mutation	SNP	C	A	-	NIBMG-K245-GB	ENST00000441802.2	-	2	3120	NIBMG

Search term fat1 returned results from TCGA Exome Somatic Variation section.

BM-TCGA: Buccal Mucosa; OC-TCGA: Oral Cavity; OT-TCGA: Oral Tongue

NOTE: Data from Head and Neck Squamous Cell carcinoma project of TCGA (HNSCC-TCGA)

DBID	Gene name	Entrez Id	Disease	Chrom	Start	End	Genome change	UCSC Browser	cDNA change	Codon change	Protein change	Variant class	Variant type	Referrence Allele	Tumor Allele	dbSNP ID	Sample Id	Annotation transcript	Transcript strand	Transcript exon	Transcript position	Reference
tcga121	FAT1	2195	OT-TCGA	chr4	187549909	187549910	g.chr4:187549909_187549910insA	chr4:187549909-187549910	c.4331_4332insT	c.(4330-4332)atcfs	p.I1444fs	Frame_Shift_Ins	INS	-	A		TCGA-4P-AA8J-01A-11D	ENST00000441802.2	-	8	4540_4541	TCGA
tcga487	FAT1	2195	OT-TCGA	chr4	187542087	187542088	g.chr4:187542087_187542088insA	chr4:187542087-187542088	c.5652_5653insT	c.(5650-5655)tatgaafs	p.E1885fs	Frame_Shift_Ins	INS	-	A		TCGA-BA-4075-01A-01D	ENST00000441802.2	-	10	5861_5862	TCGA
tcga774	FAT1	2195	OT-TCGA	chr4	187628726	187628732	g.chr4:187628726_187628732delCAGTTTT	chr4:187628726-187628732	c.2250_2256delAAAACTG	c.(2248-2256)ggaaaactgfs	p.GKL750fs	Frame_Shift_Del	DEL	CAGTTTT	-		TCGA-BA-7269-01A-11D	ENST00000441802.2	-	2	2459_2465	TCGA
tcga2076	FAT1	2195	OT-TCGA	chr4	187539889	187539889	g.chr4:187539889delT	chr4:187539889-187539889	c.7851delA	c.(7849-7851)aaafs	p.K2617fs	Frame_Shift_Del	DEL	T	-		TCGA-CN-5370-01A-01D	ENST00000441802.2	-	10	8060	TCGA
tcga2077	FAT1	2195	OT-TCGA	chr4	187629576	187629580	g.chr4:187629576_187629580delTTGTA	chr4:187629576-187629580	c.1402_1406delTACAA	c.(1402-1407)tacaaafs	p.YK468fs	Frame_Shift_Del	DEL	TTGTA	-	rs187074121	TCGA-CN-5370-01A-01D	ENST00000441802.2	-	2	1611_1615	TCGA
tcga2432	FAT1	2195	OT-TCGA	chr4	187532702	187532705	g.chr4:187532702_187532705delCAAA	chr4:187532702-187532705	c.9688_9691delTTTG	c.(9688-9693)tttgagfs	p.FE3230fs	Frame_Shift_Del	DEL	CAAA	-		TCGA-CN-6024-01A-11D	ENST00000441802.2	-	14	9897_9900	TCGA
tcga2733	FAT1	2195	OT-TCGA	chr4	187530425	187530425	g.chr4:187530425G>C	chr4:187530425-187530425	c.10118C>G	c.(10117-10119)tCa>tGa	p.S3373*	Nonsense_Mutation	SNP	G	C	rs199995119	TCGA-CN-A640-01A-21D	ENST00000441802.2	-	16	10327	TCGA
tcga3037	FAT1	2195	OT-TCGA	chr4	187531171	187531171	g.chr4:187531171T>A	chr4:187531171-187531171		-		Splice_Site	SNP	T	A		TCGA-CQ-5327-01A-01D	ENST00000441802.2	-	15	10063	TCGA
tcga3038	FAT1	2195	OT-TCGA	chr4	187541129	187541129	g.chr4:187541129A>C	chr4:187541129-187541129	c.6611T>G	c.(6610-6612)gTg>gGg	p.V2204G	Missense_Mutation	SNP	A	C		TCGA-CQ-5327-01A-01D	ENST00000441802.2	-	10	6820	TCGA
tcga3039	FAT1	2195	OT-TCGA	chr4	187541201	187541201	g.chr4:187541201G>A	chr4:187541201-187541201	c.6539C>T	c.(6538-6540)cCt>cTt	p.P2180L	Missense_Mutation	SNP	G	A		TCGA-CQ-5327-01A-01D	ENST00000441802.2	-	10	6748	TCGA
tcga4254	FAT1	2195	OT-TCGA	chr4	187524392	187524393	g.chr4:187524392_187524393insTGTGT	chr4:187524392-187524393	c.11287_11288insACACA	c.(11287-11289)agcfs	p.S3763fs	Frame_Shift_Ins	INS	-	TGTGT		TCGA-CQ-A4CE-01A-11D	ENST00000441802.2	-	19	11496_11497	TCGA
tcga4524	FAT1	2195	OT-TCGA	chr4	187541184	187541184	g.chr4:187541184A>C	chr4:187541184-187541184	c.6556T>G	c.(6556-6558)Ttc>Gtc	p.F2186V	Missense_Mutation	SNP	A	C		TCGA-CR-7382-01A-11D	ENST00000441802.2	-	10	6765	TCGA
tcga5006	FAT1	2195	OT-TCGA	chr4	187535344	187535344	g.chr4:187535344C>T	chr4:187535344-187535344		-		Splice_Site	SNP	C	T		TCGA-CR-7394-01A-11D	ENST00000441802.2	-	12	9439	TCGA
tcga6616	FAT1	2195	OT-TCGA	chr4	187627830	187627830	g.chr4:187627830G>C	chr4:187627830-187627830	c.3152C>G	c.(3151-3153)tCa>tGa	p.S1051*	Nonsense_Mutation	SNP	G	C		TCGA-CV-6441-01A-11D	ENST00000441802.2	-	2	3361	TCGA
tcga8361	FAT1	2195	OT-TCGA	chr4	187525003	187525003	g.chr4:187525003G>C	chr4:187525003-187525003	c.10677C>G	c.(10675-10677)taC>taG	p.Y3559*	Nonsense_Mutation	SNP	G	C		TCGA-CV-6952-01A-11D	ENST00000441802.2	-	19	10886	TCGA
tcga8575	FAT1	2195	OT-TCGA	chr4	187525003	187525003	g.chr4:187525003G>C	chr4:187525003-187525003	c.10677C>G	c.(10675-10677)taC>taG	p.Y3559*	Nonsense_Mutation	SNP	G	C		TCGA-CV-6952-01A-11D	ENST00000441802.2	-	19	10886	TCGA
tcga9179	FAT1	2195	OT-TCGA	chr4	187538253	187538253	g.chr4:187538253A>C	chr4:187538253-187538253	c.8981T>G	c.(8980-8982)cTt>cGt	p.L2994R	Missense_Mutation	SNP	A	C		TCGA-CV-6956-01A-21D	ENST00000441802.2	-	11	9190	TCGA
tcga9424	FAT1	2195	OT-TCGA	chr4	187538253	187538253	g.chr4:187538253A>C	chr4:187538253-187538253	c.8981T>G	c.(8980-8982)cTt>cGt	p.L2994R	Missense_Mutation	SNP	A	C		TCGA-CV-6956-01A-21D	ENST00000441802.2	-	11	9190	TCGA
tcga12744	FAT1	2195	OT-TCGA	chr4	187554856	187554856	g.chr4:187554856G>A	chr4:187554856-187554856	c.4305C>T	c.(4303-4305)acC>acT	p.T1435T	Silent	SNP	G	A		TCGA-CV-7446-01A-11D	ENST00000441802.2	-	7	4514	TCGA
tcga13463	FAT1	2195	OT-TCGA	chr4	187530348	187530348	g.chr4:187530348C>A	chr4:187530348-187530348	c.10195G>T	c.(10195-10197)Gac>Tac	p.D3399Y	Missense_Mutation	SNP	C	A		TCGA-CV-A6JU-01A-11D	ENST00000441802.2	-	16	10404	TCGA
tcga13658	FAT1	2195	OT-TCGA	chr4	187630459	187630459	g.chr4:187630459C>G	chr4:187630459-187630459	c.523G>C	c.(523-525)Gat>Cat	p.D175H	Missense_Mutation	SNP	C	G		TCGA-CX-7085-01A-21D	ENST00000441802.2	-	2	732	TCGA
tcga14322	FAT1	2195	OT-TCGA	chr4	187540460	187540460	g.chr4:187540460T>C	chr4:187540460-187540460	c.7280A>G	c.(7279-7281)tAt>tGt	p.Y2427C	Missense_Mutation	SNP	T	C	rs372188939	TCGA-D6-A4Z9-01A-11D	ENST00000441802.2	-	10	7489	TCGA
tcga14524	FAT1	2195	OT-TCGA	chr4	187630870	187630870	g.chr4:187630870C>A	chr4:187630870-187630870	c.112G>T	c.(112-114)Gag>Tag	p.E38*	Nonsense_Mutation	SNP	C	A		TCGA-D6-A4ZB-01A-11D	ENST00000441802.2	-	2	321	TCGA
tcga15242	FAT1	2195	OT-TCGA	chr4	187542861	187542861	g.chr4:187542861G>A	chr4:187542861-187542861	c.4879C>T	c.(4879-4881)Cga>Tga	p.R1627*	Nonsense_Mutation	SNP	G	A		TCGA-DQ-5631-01A-01D	ENST00000441802.2	-	10	5088	TCGA
tcga15351	FAT1	2195	OT-TCGA	chr4	187531028	187531029	g.chr4:187531028_187531029insT	chr4:187531028-187531029	c.9994_9995insA	c.(9994-9996)accfs	p.T3332fs	Frame_Shift_Ins	INS	-	T		TCGA-DQ-7592-01A-11D	ENST00000441802.2	-	15	10203_10204	TCGA
tcga15830	FAT1	2195	OT-TCGA	chr4	187538955	187538955	g.chr4:187538955C>A	chr4:187538955-187538955	c.8785G>T	c.(8785-8787)Gag>Tag	p.E2929*	Nonsense_Mutation	SNP	C	A		TCGA-F7-A61S-01A-11D	ENST00000441802.2	-	10	8994	TCGA
tcga16955	FAT1	2195	OT-TCGA	chr4	187540420	187540426	g.chr4:187540420_187540426delAATGACA	chr4:187540420-187540426	c.7314_7320delTGTCATT	c.(7312-7320)tttgtcattfs	p.FVI2438fs	Frame_Shift_Del	DEL	AATGACA	-		TCGA-IQ-A61E-01A-22D	ENST00000441802.2	-	10	7523_7529	TCGA
tcga17890	FAT1	2195	OT-TCGA	chr4	187540557	187540557	g.chr4:187540557delA	chr4:187540557-187540557	c.7183delT	c.(7183-7185)tatfs	p.Y2395fs	Frame_Shift_Del	DEL	A	-	rs371310336	TCGA-MT-A67A-01A-11D	ENST00000441802.2	-	10	7392	TCGA
tcga19578	FAT1	2195	BM-TCGA	chr4	187549454	187549454	g.chr4:187549454delG	chr4:187549454-187549454	c.4664delC	c.(4663-4665)acgfs	p.T1555fs	Frame_Shift_Del	DEL	G	-	rs201060026	TCGA-CN-4731-01A-01D	ENST00000441802.2	-	9	4873	TCGA
tcga19579	FAT1	2195	BM-TCGA	chr4	187557332	187557333	g.chr4:187557332_187557333insA	chr4:187557332-187557333	c.4029_4030insT	c.(4027-4032)attgaafs	p.E1344fs	Frame_Shift_Ins	INS	-	A		TCGA-CN-4731-01A-01D	ENST00000441802.2	-	6	4238_4239	TCGA
tcga20092	FAT1	2195	BM-TCGA	chr4	187532709	187532710	g.chr4:187532709_187532710insG	chr4:187532709-187532710	c.9683_9684insC	c.(9682-9684)cctfs	p.P3228fs	Frame_Shift_Ins	INS	-	G		TCGA-CQ-5334-01A-01D	ENST00000441802.2	-	14	9892_9893	TCGA
tcga20370	FAT1	2195	BM-TCGA	chr4	187549314	187549314	g.chr4:187549314C>A	chr4:187549314-187549314	c.4804G>T	c.(4804-4806)Gag>Tag	p.E1602*	Nonsense_Mutation	SNP	C	A		TCGA-CQ-7064-01A-11D	ENST00000441802.2	-	9	5013	TCGA
tcga20629	FAT1	2195	BM-TCGA	chr4	187628153	187628154	g.chr4:187628153_187628154insC	chr4:187628153-187628154	c.2828_2829insG	c.(2827-2829)ggafs	p.G943fs	Frame_Shift_Ins	INS	-	C		TCGA-CQ-A4CG-01A-11D	ENST00000441802.2	-	2	3037_3038	TCGA
tcga20725	FAT1	2195	BM-TCGA	chr4	187549662	187549662	g.chr4:187549662G>A	chr4:187549662-187549662	c.4579C>T	c.(4579-4581)Cag>Tag	p.Q1527*	Nonsense_Mutation	SNP	G	A		TCGA-CQ-A4CI-01A-11D	ENST00000441802.2	-	8	4788	TCGA
tcga24087	FAT1	2195	BM-TCGA	chr4	187542754	187542754	g.chr4:187542754G>A	chr4:187542754-187542754	c.4986C>T	c.(4984-4986)aaC>aaT	p.N1662N	Silent	SNP	G	A	rs367779643	TCGA-F7-A624-01A-22D	ENST00000441802.2	-	10	5195	TCGA
tcga25358	FAT1	2195	BM-TCGA	chr4	187530372	187530372	g.chr4:187530372C>A	chr4:187530372-187530372	c.10171G>T	c.(10171-10173)Gaa>Taa	p.E3391*	Nonsense_Mutation	SNP	C	A		TCGA-H7-8501-01A-11D	ENST00000441802.2	-	16	10380	TCGA
tcga25592	FAT1	2195	BM-TCGA	chr4	187549458	187549459	g.chr4:187549458_187549459delCG	chr4:187549458-187549459	c.4659_4660delCG	c.(4657-4662)agcgacfs	p.SD1553fs	Frame_Shift_Del	DEL	CG	-		TCGA-HD-A4C1-01A-11D	ENST00000441802.2	-	9	4868_4869	TCGA
tcga25593	FAT1	2195	BM-TCGA	chr4	187560919	187560919	g.chr4:187560919G>C	chr4:187560919-187560919	c.3599C>G	c.(3598-3600)tCa>tGa	p.S1200*	Nonsense_Mutation	SNP	G	C		TCGA-HD-A4C1-01A-11D	ENST00000441802.2	-	4	3808	TCGA
tcga27540	FAT1	2195	OC-TCGA	chr4	187630504	187630504	g.chr4:187630504C>A	chr4:187630504-187630504	c.478G>T	c.(478-480)Gaa>Taa	p.E160*	Nonsense_Mutation	SNP	C	A		TCGA-CN-6018-01A-11D	ENST00000441802.2	-	2	687	TCGA
tcga28701	FAT1	2195	OC-TCGA	chr4	187628651	187628652	g.chr4:187628651_187628652insA	chr4:187628651-187628652	c.2330_2331insT	c.(2329-2331)ttafs	p.L777fs	Frame_Shift_Ins	INS	-	A		TCGA-CQ-A4CD-01A-21D	ENST00000441802.2	-	2	2539_2540	TCGA
tcga30565	FAT1	2195	OC-TCGA	chr4	187628208	187628208	g.chr4:187628208G>C	chr4:187628208-187628208	c.2774C>G	c.(2773-2775)cCt>cGt	p.P925R	Missense_Mutation	SNP	G	C		TCGA-CR-7379-01A-11D	ENST00000441802.2	-	2	2983	TCGA
tcga30902	FAT1	2195	OC-TCGA	chr4	187532590	187532590	g.chr4:187532590G>C	chr4:187532590-187532590	c.9803C>G	c.(9802-9804)tCa>tGa	p.S3268*	Nonsense_Mutation	SNP	G	C		TCGA-CR-7386-01A-11D	ENST00000441802.2	-	14	10012	TCGA
tcga30903	FAT1	2195	OC-TCGA	chr4	187539227	187539227	g.chr4:187539227G>C	chr4:187539227-187539227	c.8513C>G	c.(8512-8514)tCa>tGa	p.S2838*	Nonsense_Mutation	SNP	G	C		TCGA-CR-7386-01A-11D	ENST00000441802.2	-	10	8722	TCGA
tcga30904	FAT1	2195	OC-TCGA	chr4	187629184	187629184	g.chr4:187629184G>A	chr4:187629184-187629184	c.1798C>T	c.(1798-1800)Cag>Tag	p.Q600*	Nonsense_Mutation	SNP	G	A		TCGA-CR-7386-01A-11D	ENST00000441802.2	-	2	2007	TCGA
tcga31128	FAT1	2195	OC-TCGA	chr4	187628809	187628809	g.chr4:187628809G>A	chr4:187628809-187628809	c.2173C>T	c.(2173-2175)Cag>Tag	p.Q725*	Nonsense_Mutation	SNP	G	A		TCGA-CR-7395-01A-11D	ENST00000441802.2	-	2	2382	TCGA
tcga31282	FAT1	2195	OC-TCGA	chr4	187524850	187524850	g.chr4:187524850G>C	chr4:187524850-187524850	c.10830C>G	c.(10828-10830)taC>taG	p.Y3610*	Nonsense_Mutation	SNP	G	C		TCGA-CV-5966-01A-11D	ENST00000441802.2	-	19	11039	TCGA
tcga31425	FAT1	2195	OC-TCGA	chr4	187524850	187524850	g.chr4:187524850G>C	chr4:187524850-187524850	c.10830C>G	c.(10828-10830)taC>taG	p.Y3610*	Nonsense_Mutation	SNP	G	C		TCGA-CV-5966-01A-11D	ENST00000441802.2	-	19	11039	TCGA
tcga31810	FAT1	2195	OC-TCGA	chr4	187524190	187524190	g.chr4:187524190T>C	chr4:187524190-187524190		-		Splice_Site	SNP	T	C		TCGA-CV-6938-01A-11D	ENST00000441802.2	-	20	11560	TCGA
tcga31982	FAT1	2195	OC-TCGA	chr4	187524190	187524190	g.chr4:187524190T>C	chr4:187524190-187524190		-		Splice_Site	SNP	T	C		TCGA-CV-6938-01A-11D	ENST00000441802.2	-	20	11560	TCGA
tcga32237	FAT1	2195	OC-TCGA	chr4	187541705	187541721	g.chr4:187541705_187541721delAAAGGCTCATTGATTGG	chr4:187541705-187541721	c.6019_6035delCCAATCAATGAGCCTT	c.(6019-6036)ccaatcaatgagccttt	p.PINEPL2007fs	Frame_Shift_Del	DEL	AAAGGCTCATTGATTGG	-	rs371979270\|rs375293079	TCGA-CV-6942-01A-21D	ENST00000441802.2	-	10	6228_6244	TCGA
tcga32413	FAT1	2195	OC-TCGA	chr4	187539957	187539959	g.chr4:187539957_187539959delGTG	chr4:187539957-187539959	c.7781_7783delCAC	c.(7780-7785)ccacaa>caa	p.P2594del	In_Frame_Del	DEL	GTG	-		TCGA-CV-6955-01A-11D	ENST00000441802.2	-	10	7990_7992	TCGA
tcga32414	FAT1	2195	OC-TCGA	chr4	187629100	187629100	g.chr4:187629100G>A	chr4:187629100-187629100	c.1882C>T	c.(1882-1884)Cga>Tga	p.R628*	Nonsense_Mutation	SNP	G	A		TCGA-CV-6955-01A-11D	ENST00000441802.2	-	2	2091	TCGA
tcga32415	FAT1	2195	OC-TCGA	chr4	187630411	187630411	g.chr4:187630411G>A	chr4:187630411-187630411	c.571C>T	c.(571-573)Cga>Tga	p.R191*	Nonsense_Mutation	SNP	G	A		TCGA-CV-6955-01A-11D	ENST00000441802.2	-	2	780	TCGA
tcga32520	FAT1	2195	OC-TCGA	chr4	187629100	187629100	g.chr4:187629100G>A	chr4:187629100-187629100	c.1882C>T	c.(1882-1884)Cga>Tga	p.R628*	Nonsense_Mutation	SNP	G	A		TCGA-CV-6955-01A-11D	ENST00000441802.2	-	2	2091	TCGA
tcga32521	FAT1	2195	OC-TCGA	chr4	187630411	187630411	g.chr4:187630411G>A	chr4:187630411-187630411	c.571C>T	c.(571-573)Cga>Tga	p.R191*	Nonsense_Mutation	SNP	G	A		TCGA-CV-6955-01A-11D	ENST00000441802.2	-	2	780	TCGA
tcga33274	FAT1	2195	OC-TCGA	chr4	187627774	187627774	g.chr4:187627774G>A	chr4:187627774-187627774	c.3208C>T	c.(3208-3210)Cga>Tga	p.R1070*	Nonsense_Mutation	SNP	G	A		TCGA-CV-7091-01A-11D	ENST00000441802.2	-	2	3417	TCGA
tcga33479	FAT1	2195	OC-TCGA	chr4	187627774	187627774	g.chr4:187627774G>A	chr4:187627774-187627774	c.3208C>T	c.(3208-3210)Cga>Tga	p.R1070*	Nonsense_Mutation	SNP	G	A		TCGA-CV-7091-01A-11D	ENST00000441802.2	-	2	3417	TCGA
tcga33751	FAT1	2195	OC-TCGA	chr4	187539252	187539252	g.chr4:187539252G>A	chr4:187539252-187539252	c.8488C>T	c.(8488-8490)Cag>Tag	p.Q2830*	Nonsense_Mutation	SNP	G	A		TCGA-CV-7095-01A-21D	ENST00000441802.2	-	10	8697	TCGA
tcga34044	FAT1	2195	OC-TCGA	chr4	187539252	187539252	g.chr4:187539252G>A	chr4:187539252-187539252	c.8488C>T	c.(8488-8490)Cag>Tag	p.Q2830*	Nonsense_Mutation	SNP	G	A		TCGA-CV-7095-01A-21D	ENST00000441802.2	-	10	8697	TCGA
tcga34688	FAT1	2195	OC-TCGA	chr4	187525001	187525001	g.chr4:187525001G>C	chr4:187525001-187525001	c.10679C>G	c.(10678-10680)tCa>tGa	p.S3560*	Nonsense_Mutation	SNP	G	C		TCGA-CV-7099-01A-41D	ENST00000441802.2	-	19	10888	TCGA
tcga34689	FAT1	2195	OC-TCGA	chr4	187525110	187525110	g.chr4:187525110G>A	chr4:187525110-187525110	c.10570C>T	c.(10570-10572)Cag>Tag	p.Q3524*	Nonsense_Mutation	SNP	G	A		TCGA-CV-7099-01A-41D	ENST00000441802.2	-	19	10779	TCGA
tcga35228	FAT1	2195	OC-TCGA	chr4	187629108	187629108	g.chr4:187629108G>T	chr4:187629108-187629108	c.1874C>A	c.(1873-1875)tCa>tAa	p.S625*	Nonsense_Mutation	SNP	G	T		TCGA-CV-7183-01A-11D	ENST00000441802.2	-	2	2083	TCGA
tcga35306	FAT1	2195	OC-TCGA	chr4	187629108	187629108	g.chr4:187629108G>T	chr4:187629108-187629108	c.1874C>A	c.(1873-1875)tCa>tAa	p.S625*	Nonsense_Mutation	SNP	G	T		TCGA-CV-7183-01A-11D	ENST00000441802.2	-	2	2083	TCGA
tcga35560	FAT1	2195	OC-TCGA	chr4	187534466	187534467	g.chr4:187534466_187534467insG	chr4:187534466-187534467	c.9259_9260insC	c.(9259-9261)cgtfs	p.R3087fs	Frame_Shift_Ins	INS	-	G	rs375998390	TCGA-CV-7252-01A-11D	ENST00000441802.2	-	13	9468_9469	TCGA
tcga35561	FAT1	2195	OC-TCGA	chr4	187539457	187539469	g.chr4:187539457_187539469delCTTCAGTCTCCCG	chr4:187539457-187539469	c.8271_8283delCGGGAGACTGAAG	c.(8269-8283)agcgggagactgaagfs	p.SGRLK2757fs	Frame_Shift_Del	DEL	CTTCAGTCTCCCG	-	rs374236368	TCGA-CV-7252-01A-11D	ENST00000441802.2	-	10	8480_8492	TCGA
tcga35895	FAT1	2195	OC-TCGA	chr4	187534466	187534467	g.chr4:187534466_187534467insG	chr4:187534466-187534467	c.9259_9260insC	c.(9259-9261)cgtfs	p.R3087fs	Frame_Shift_Ins	INS	-	G	rs375998390	TCGA-CV-7252-01A-11D	ENST00000441802.2	-	13	9468_9469	TCGA
tcga35896	FAT1	2195	OC-TCGA	chr4	187539457	187539469	g.chr4:187539457_187539469delCTTCAGTCTCCCG	chr4:187539457-187539469	c.8271_8283delCGGGAGACTGAAG	c.(8269-8283)agcgggagactgaagfs	p.SGRLK2757fs	Frame_Shift_Del	DEL	CTTCAGTCTCCCG	-	rs374236368	TCGA-CV-7252-01A-11D	ENST00000441802.2	-	10	8480_8492	TCGA
tcga36706	FAT1	2195	OC-TCGA	chr4	187540845	187540845	g.chr4:187540845C>A	chr4:187540845-187540845	c.6895G>T	c.(6895-6897)Gga>Tga	p.G2299*	Nonsense_Mutation	SNP	C	A		TCGA-CV-7263-01A-11D	ENST00000441802.2	-	10	7104	TCGA
tcga36873	FAT1	2195	OC-TCGA	chr4	187540845	187540845	g.chr4:187540845C>A	chr4:187540845-187540845	c.6895G>T	c.(6895-6897)Gga>Tga	p.G2299*	Nonsense_Mutation	SNP	C	A		TCGA-CV-7263-01A-11D	ENST00000441802.2	-	10	7104	TCGA
tcga37132	FAT1	2195	OC-TCGA	chr4	187549812	187549812	g.chr4:187549812G>A	chr4:187549812-187549812	c.4429C>T	c.(4429-4431)Caa>Taa	p.Q1477*	Nonsense_Mutation	SNP	G	A		TCGA-CV-7413-01A-11D	ENST00000441802.2	-	8	4638	TCGA
tcga37226	FAT1	2195	OC-TCGA	chr4	187549812	187549812	g.chr4:187549812G>A	chr4:187549812-187549812	c.4429C>T	c.(4429-4431)Caa>Taa	p.Q1477*	Nonsense_Mutation	SNP	G	A		TCGA-CV-7413-01A-11D	ENST00000441802.2	-	8	4638	TCGA
tcga37504	FAT1	2195	OC-TCGA	chr4	187539265	187539266	g.chr4:187539265_187539266insC	chr4:187539265-187539266	c.8474_8475insG	c.(8473-8475)ggafs	p.G2825fs	Frame_Shift_Ins	INS	-	C		TCGA-CV-7414-01A-11D	ENST00000441802.2	-	10	8683_8684	TCGA
tcga38585	FAT1	2195	OC-TCGA	chr4	187549762	187549763	g.chr4:187549762_187549763insA	chr4:187549762-187549763	c.4478_4479insT	c.(4477-4479)ctgfs	p.L1493fs	Frame_Shift_Ins	INS	-	A		TCGA-CV-7427-01A-11D	ENST00000441802.2	-	8	4687_4688	TCGA
tcga38586	FAT1	2195	OC-TCGA	chr4	187628329	187628329	g.chr4:187628329G>A	chr4:187628329-187628329	c.2653C>T	c.(2653-2655)Cga>Tga	p.R885*	Nonsense_Mutation	SNP	G	A		TCGA-CV-7427-01A-11D	ENST00000441802.2	-	2	2862	TCGA
tcga39553	FAT1	2195	OC-TCGA	chr4	187629852	187629853	g.chr4:187629852_187629853insT	chr4:187629852-187629853	c.1129_1130insA	c.(1129-1131)agtfs	p.S377fs	Frame_Shift_Ins	INS	-	T		TCGA-CV-7435-01A-11D	ENST00000441802.2	-	2	1338_1339	TCGA
tcga39658	FAT1	2195	OC-TCGA	chr4	187629852	187629853	g.chr4:187629852_187629853insT	chr4:187629852-187629853	c.1129_1130insA	c.(1129-1131)agtfs	p.S377fs	Frame_Shift_Ins	INS	-	T		TCGA-CV-7435-01A-11D	ENST00000441802.2	-	2	1338_1339	TCGA
tcga43117	FAT1	2195	OC-TCGA	chr4	187542861	187542861	g.chr4:187542861G>A	chr4:187542861-187542861	c.4879C>T	c.(4879-4881)Cga>Tga	p.R1627*	Nonsense_Mutation	SNP	G	A		TCGA-CV-A45Q-01A-11D	ENST00000441802.2	-	10	5088	TCGA
tcga43118	FAT1	2195	OC-TCGA	chr4	187628110	187628110	g.chr4:187628110G>A	chr4:187628110-187628110	c.2872C>T	c.(2872-2874)Cag>Tag	p.Q958*	Nonsense_Mutation	SNP	G	A		TCGA-CV-A45Q-01A-11D	ENST00000441802.2	-	2	3081	TCGA
tcga43747	FAT1	2195	OC-TCGA	chr4	187538223	187538223	g.chr4:187538223G>C	chr4:187538223-187538223	c.9011C>G	c.(9010-9012)tCa>tGa	p.S3004*	Nonsense_Mutation	SNP	G	C		TCGA-CV-A6JE-01A-11D	ENST00000441802.2	-	11	9220	TCGA
tcga44108	FAT1	2195	OC-TCGA	chr4	187542734	187542734	g.chr4:187542734G>C	chr4:187542734-187542734	c.5006C>G	c.(5005-5007)tCa>tGa	p.S1669*	Nonsense_Mutation	SNP	G	C		TCGA-CV-A6JZ-01A-11D	ENST00000441802.2	-	10	5215	TCGA
tcga44777	FAT1	2195	OC-TCGA	chr4	187527363	187527363	g.chr4:187527363G>C	chr4:187527363-187527363	c.10211C>G	c.(10210-10212)tCa>tGa	p.S3404*	Nonsense_Mutation	SNP	G	C		TCGA-CV-A6K2-01A-11D	ENST00000441802.2	-	17	10420	TCGA
tcga44778	FAT1	2195	OC-TCGA	chr4	187549761	187549761	g.chr4:187549761G>A	chr4:187549761-187549761	c.4480C>T	c.(4480-4482)Cag>Tag	p.Q1494*	Nonsense_Mutation	SNP	G	A		TCGA-CV-A6K2-01A-11D	ENST00000441802.2	-	8	4689	TCGA
tcga44779	FAT1	2195	OC-TCGA	chr4	187560919	187560919	g.chr4:187560919G>C	chr4:187560919-187560919	c.3599C>G	c.(3598-3600)tCa>tGa	p.S1200*	Nonsense_Mutation	SNP	G	C		TCGA-CV-A6K2-01A-11D	ENST00000441802.2	-	4	3808	TCGA
tcga45137	FAT1	2195	OC-TCGA	chr4	187540589	187540589	g.chr4:187540589T>C	chr4:187540589-187540589	c.7151A>G	c.(7150-7152)aAt>aGt	p.N2384S	Missense_Mutation	SNP	T	C	rs139480903	TCGA-CX-7082-01A-11D	ENST00000441802.2	-	10	7360	TCGA
tcga45302	FAT1	2195	OC-TCGA	chr4	187525008	187525008	g.chr4:187525008C>A	chr4:187525008-187525008	c.10672G>T	c.(10672-10674)Gaa>Taa	p.E3558*	Nonsense_Mutation	SNP	C	A		TCGA-H7-7774-01A-21D	ENST00000441802.2	-	19	10881	TCGA
tcga45303	FAT1	2195	OC-TCGA	chr4	187539863	187539863	g.chr4:187539863C>T	chr4:187539863-187539863	c.7877G>A	c.(7876-7878)gGc>gAc	p.G2626D	Missense_Mutation	SNP	C	T		TCGA-H7-7774-01A-21D	ENST00000441802.2	-	10	8086	TCGA
tcga45494	FAT1	2195	OC-TCGA	chr4	187542225	187542225	g.chr4:187542225C>A	chr4:187542225-187542225	c.5515G>T	c.(5515-5517)Gaa>Taa	p.E1839*	Nonsense_Mutation	SNP	C	A		TCGA-HD-A633-01A-11D	ENST00000441802.2	-	10	5724	TCGA
tcga45614	FAT1	2195	OC-TCGA	chr4	187629341	187629342	g.chr4:187629341_187629342insTA	chr4:187629341-187629342	c.1640_1641insTA	c.(1639-1641)tacfs	p.Y547fs	Frame_Shift_Ins	INS	-	TA		TCGA-HD-A6I0-01A-11D	ENST00000441802.2	-	2	1849_1850	TCGA

Search results

Exome

Whole Genome

Variations from dbGENVOC

Search term fat1 returned results from Exome Somatic dbGENVOC section.

OSCC_GB: Gingivo-buccal oral squamous cell carcinoma

Graphical Representation of dbGENVOC variations

Variations from TCGA (Exome somatic specific)

Search term fat1 returned results from TCGA Exome Somatic Variation section.

BM-TCGA: Buccal Mucosa; OC-TCGA: Oral Cavity; OT-TCGA: Oral Tongue

NOTE: Data from Head and Neck Squamous Cell carcinoma project of TCGA (HNSCC-TCGA)

Graphical Representation of TCGA data

Variations from peer-reviewed papers

OSCC: Oral Squamous Cell Carcinoma OTSCC: Oral Tongue Squamous Cell Carcinoma

Graphical Representation of peer-reviewed paper data

DBID	Gene name	Entrez Id	Disease	Chrom	Start	End	Genome change	UCSC Browser	cDNA change	Codon change	Protein change	Variant class	Variant type	Referrence Allele	Tumor Allele	dbSNP ID	Sample Id	Annotation transcript	Transcript strand	Transcript exon	Transcript position	Reference
esj486	FAT1	2195	OTSCC	chr4	187629223	187629223	g.chr4:187629223G>A	chr4:187629223-187629223	c.1759C>T	c.(1759-1761)Caa>Taa	p.Q587*	Nonsense_Mutation	SNP	G	A	rs544192161	38T	ENST00000441802.2	-	2	1968	28939077
esj2888	FAT1	2195	OTSCC	chr4	187532672	187532672	g.chr4:187532672C>T	chr4:187532672-187532672	c.9721G>A	c.(9721-9723)Gag>Aag	p.E3241K	Missense_Mutation	SNP	C	T		OT44	ENST00000441802.2	-	14	9930	26834999
esj2889	FAT1	2195	OTSCC	chr4	187539951	187539951	g.chr4:187539951G>A	chr4:187539951-187539951	c.7789C>T	c.(7789-7791)Cga>Tga	p.R2597*	Nonsense_Mutation	SNP	G	A		OT44	ENST00000441802.2	-	10	7998	26834999
esj2890	FAT1	2195	OTSCC	chr4	187549359	187549359	g.chr4:187549359G>C	chr4:187549359-187549359	c.4759C>G	c.(4759-4761)Ctg>Gtg	p.L1587V	Missense_Mutation	SNP	G	C		OT24	ENST00000441802.2	-	9	4968	26834999
esj10696	FAT1	2195	OSCC	chr4	187554786	187554786	g.chr4:187554786G>C	chr4:187554786-187554786				Intron	SNP	G	C	rs139066208	Sample_P01	ENST00000441802.2	-	7	4533	28878238
esj10697	FAT1	2195	OSCC	chr4	187628275	187628275	g.chr4:187628275C>A	chr4:187628275-187628275	c.2707G>T	c.(2707-2709)Gaa>Taa	p.E903*	Nonsense_Mutation	SNP	C	A		Sample_P01	ENST00000441802.2	-	2	2916	28878238
esj17157	FAT1	2195	OSCC	chr4	187630870	187630870	g.chr4:187630870C>A	chr4:187630870-187630870	c.112G>T	c.(112-114)Gag>Tag	p.E38*	Nonsense_Mutation	SNP	C	A		Sample_P25	ENST00000441802.2	-	2	321	28878238
esj17441	FAT1	2195	OSCC	chr4	187628329	187628329	g.chr4:187628329G>A	chr4:187628329-187628329	c.2653C>T	c.(2653-2655)Cga>Tga	p.R885*	Nonsense_Mutation	SNP	G	A		Sample_P26	ENST00000441802.2	-	2	2862	28878238
esj20975	FAT1	2195	OSCC	chr4	187532732	187532732	g.chr4:187532732G>C	chr4:187532732-187532732	c.9661C>G	c.(9661-9663)Ctt>Gtt	p.L3221V	Missense_Mutation	SNP	G	C		Sample_P40	ENST00000441802.2	-	14	9870	28878238
esj22551	FAT1	2195	OSCC	chr4	187584713	187584713	g.chr4:187584713A>C	chr4:187584713-187584713	c.3320T>G	c.(3319-3321)cTa>cGa	p.L1107R	Missense_Mutation	SNP	A	C		Sample_P45	ENST00000441802.2	-	3	3529	28878238
esj24156	FAT1	2195	OSCC	chr4	187535427	187535427	g.chr4:187535427G>A	chr4:187535427-187535427	c.9147C>T	c.(9145-9147)gaC>gaT	p.D3049D	Silent	SNP	G	A		Sample_P50	ENST00000441802.2	-	12	9356	28878238
esj25086	FAT1	2195	OSCC	chr4	187539564	187539564	g.chr4:187539564G>A	chr4:187539564-187539564	c.8176C>T	c.(8176-8178)Cga>Tga	p.R2726*	Nonsense_Mutation	SNP	G	A		Sample_P54	ENST00000441802.2	-	10	8385	28878238
esj25909	FAT1	2195	OSCC	chr4	187557178	187557178	g.chr4:187557178C>T	chr4:187557178-187557178		-		Splice_Site	SNP	C	T		Sample_P55	ENST00000441802.2	-	6	4393	28878238
esj25910	FAT1	2195	OSCC	chr4	187630411	187630411	g.chr4:187630411G>A	chr4:187630411-187630411	c.571C>T	c.(571-573)Cga>Tga	p.R191*	Nonsense_Mutation	SNP	G	A		Sample_P55	ENST00000441802.2	-	2	780	28878238
esj26462	FAT1	2195	OSCC	chr4	187542404	187542404	g.chr4:187542404G>C	chr4:187542404-187542404	c.5336C>G	c.(5335-5337)tCa>tGa	p.S1779*	Nonsense_Mutation	SNP	G	C		Sample_P56	ENST00000441802.2	-	10	5545	28878238
esj26837	FAT1	2195	OSCC	chr4	187629866	187629866	g.chr4:187629866G>C	chr4:187629866-187629866	c.1116C>G	c.(1114-1116)taC>taG	p.Y372*	Nonsense_Mutation	SNP	G	C		Sample_P57	ENST00000441802.2	-	2	1325	28878238
esj27985	FAT1	2195	OSCC	chr4	187530345	187530345	g.chr4:187530345G>A	chr4:187530345-187530345	c.10198C>T	c.(10198-10200)Cga>Tga	p.R3400*	Nonsense_Mutation	SNP	G	A		Sample_P61	ENST00000441802.2	-	16	10407	28878238
esj28975	FAT1	2195	OSCC	chr4	187539925	187539925	g.chr4:187539925G>A	chr4:187539925-187539925	c.7815C>T	c.(7813-7815)atC>atT	p.I2605I	Silent	SNP	G	A		Sample_P64	ENST00000441802.2	-	10	8024	28878238
esj29245	FAT1	2195	OSCC	chr4	187531125	187531126	g.chr4:187531125_187531126insA	chr4:187531125-187531126	c.9897_9898insT	c.(9895-9900)catgagfs	p.E3300fs	Frame_Shift_Ins	INS	-	A		Sample_P10	ENST00000441802.2	-	15	10106_10107	28878238
esj29246	FAT1	2195	OSCC	chr4	187628804	187628805	g.chr4:187628804_187628805insA	chr4:187628804-187628805	c.2177_2178insT	c.(2176-2178)gtafs	p.V726fs	Frame_Shift_Ins	INS	-	A		Sample_P10	ENST00000441802.2	-	2	2386_2387	28878238
esj31590	FAT1	2195	OSCC	chr4	187539200	187539203	g.chr4:187539200_187539203delTATA	chr4:187539200-187539203	c.8537_8540delTATA	c.(8536-8541)ttatacfs	p.LY2846fs	Frame_Shift_Del	DEL	TATA	-		Sample_P63	ENST00000441802.2	-	10	8746_8749	28878238

Search results

Exome

Whole Genome

Variations from dbGENVOC

Search term fat1 returned results from Exome Somatic dbGENVOC section. OSCC_GB: Gingivo-buccal oral squamous cell carcinoma

Graphical Representation of dbGENVOC variations

Variations from TCGA (Exome somatic specific)

Search term fat1 returned results from TCGA Exome Somatic Variation section.BM-TCGA: Buccal Mucosa; OC-TCGA: Oral Cavity; OT-TCGA: Oral Tongue NOTE: Data from Head and Neck Squamous Cell carcinoma project of TCGA (HNSCC-TCGA)

Graphical Representation of TCGA data

Variations from peer-reviewed papers

OSCC: Oral Squamous Cell Carcinoma OTSCC: Oral Tongue Squamous Cell Carcinoma

Graphical Representation of peer-reviewed paper data

Search term fat1 returned results from Exome Somatic dbGENVOC section.

OSCC_GB: Gingivo-buccal oral squamous cell carcinoma

Search term fat1 returned results from TCGA Exome Somatic Variation section.

BM-TCGA: Buccal Mucosa; OC-TCGA: Oral Cavity; OT-TCGA: Oral Tongue

NOTE: Data from Head and Neck Squamous Cell carcinoma project of TCGA (HNSCC-TCGA)